Scientific Publications

This page presents an overview of all scientific publications in which Aspect Analytics was actively involved. For each publication, you can click the title to learn more about the work along with our role in the project. Every publication is accompanied by a logo of a key project collaborator.


Spatially-Aware Clustering of Ion Images in Mass Spectrometry Imaging Data Using Deep Learning

GlaxoSmithKline

Wanqiu Zhang 1 , 2 , Marc Claesen 2 , 1 , Thomas Moerman 2 , Reid M. Groseclose 3 , Etienne Waelkens 4 , Bart De Moor 1 , Nico Verbeeck 2 , 1

Analytical and Bioanalytical Chemistry :, 2021

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1: STADIUS Center for Dynamical Systems, Signal Processing, and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, Leuven, Belgium ; 2: Aspect Analytics NV, Genk, Belgium ; 3: Bioimaging, GlaxoSmithKline, Collegeville, United States ; 4: Department of Cellular and Molecular Medicine, KU Leuven, 3000 Leuven, Belgium

Metabolite Explorer: A Software Tool for Targeted Analysis of Mass Spectrometry Imaging Data

Boehringer Ingelheim

Thomas Moerman 1 , Michael Becker 2 , Nico Verbeeck 1 , Marc Claesen 1

ASMS 2020 Reboot (June 2020), Online (Texas)

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1: Aspect Analytics NV, Genk, Belgium ; 2: Boehringer Ingelheim Pharma GmbH, Biberach a.d. Riss, Germany

Spatially-Aware Clustering of Ion Images in Mass Spectrometry Imaging Data Through the Use of Pre-trained Neural Networks

KU Leuven

Wanqiu Zhang 1 , 2 , Nico Verbeeck 1 , 2 , Thomas Moerman 2 , Etienne Waelkens 3 , Marc Claesen 1 , 2 , Bart De Moor 1

ASMS 2020 Reboot (June 2020), Online (Texas)

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1: KU Leuven, ESAT-STADIUS, Leuven, Belgium ; 2: Aspect Analytics NV, Genk, Belgium ; 3: KU Leuven, Dept. of Cellular and Molecular Medicine, Leuven, Belgium

Rapid Bioinformatics Prototyping Based on a Public Application Programming Interface

Bruker Daltonics

J. H. Kobarg 1 , N. Verbeeck 2 , D. Lachmund 3 , J. von Schroeder 3 , S.O. Deininger 1 , T. Moerman 2 , S. Schiffler 1 , J. Singe 1 , D. Trede 1 , M. Claesen 2 , T. Boskamp 1 , 3

Ourcon VII (October 2019), Saint-Malo, France

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1: SCiLS / Bruker Daltonic GmbH, Bremen, Germany ; 2: Aspect Analytics NV, Genk, Belgium ; 3: University of Bremen, Center for Industrial Mathematics, Bremen, Germany

Unsupervised Machine Learning for Exploratory Data Analysis in Imaging Mass Spectrometry

Vanderbilt University

Nico Verbeeck 1 , 2 , 3 , Richard M. Caprioli 4 , 5 , 6 , 7 , 8 , Raf Van de Plas 1 , 4 , 5

Mass Spectrometry Reviews 39:245-291, 2020

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1: Delft Center for Systems and Control, Delft University of Technology ‐ TU Delft, Delft, The Netherlands ; 2: Aspect Analytics NV, Genk, Belgium ; 3: STADIUS Center for Dynamical Systems, Signal Processing, and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, Leuven, Belgium ; 4: Mass Spectrometry Research Center, Vanderbilt University, Nashville, TN ; 5: Department of Biochemistry, Vanderbilt University, Nashville, TN ; 6: Department of Chemistry, Vanderbilt University, Nashville, TN ; 7: Department of Pharmacology, Vanderbilt University, Nashville, TN ; 8: Department of Medicine, Vanderbilt University, Nashville, TN

Evaluation of Distance Metrics and Spatial Autocorrelation in Uniform Manifold Approximation and Projection Applied to Mass Spectrometry Imaging Data

KU Leuven

Tina Smets 1 , Nico Verbeeck 1 , 2 , Marc Claesen 1 , 2 , Arndt Asperger 3 , Gerard Griffioen 4 , Thomas Tousseyn 5 , Wim Waelput 6 , Etienne Waelkens 7 , Bart De Moor 1

Analytical Chemistry 91:5706-5714, 2019

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1: STADIUS Center for Dynamical Systems, Signal Processing, and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium ; 2: Aspect Analytics NV, C-mine 12, 3600 Genk, Belgium ; 3: Bruker Daltonik GmbH, Fahrenheitstrasse 4, 28359 Bremen, Germany ; 4: reMYND, Bio-Incubator, Gaston Geenslaan 1, 3000 Leuven, Belgium ; 5: Department of Pathology, University Hospitals KU Leuven, 3001 Leuven, Belgium ; 6: Department of Pathology, UZ-Brussel, 1000 Brussels, Belgium ; 7: Department of Cellular and Molecular Medicine, KU Leuven, 3000 Leuven, Belgium

2020

2019